I think that you need to flash FIRMWARE now.
It seem that you are still running the CURE (non bootable firmware)
Go back to Garmincure3 and Flash firmware. As Caty says above the 13xx can boot even if you have not a single file.
I did it today (Booted a 1300 with a blank but correctly formatted hard drive).It creates the needed files by itself.
Use the button on the right hand side that says ORIGINAL and make and flash original firmware.
Another way to do it is to get an older version (5.40) or (5.10) and copy the GUPDATE.GCD file to the /.system folder
(it must not be the same version that you used to make the cure if you use the gupdate.gcd method)
Also look at this post.
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